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Posts from the ‘Ecology’ Category

Do Soil Microbes Influence Plant Response to Heat Waves? (Part II)

Rachel Rubin, PhD candidate at Northern Arizona University and her team at Northern Arizona University are investigating the role soil microbes play in plant response to heat waves, including associated impacts to microbial-available and plant-available water (see part 1). Because heat waves threaten plant productivity, they present a growing challenge for agriculture, rangeland management, and restoration. Below are the results of Rachel’s experiments, some of the challenges the team faced, and the future of this research.

A herd of cows grazing in a pasture

Heat waves present a growing challenge for agriculture, rangeland management, and restoration.

Challenges

Rachel says the experiment was not without its difficulties. After devoting weeks towards custom wiring the electrical array, the team had to splice heat-resistant romex wire leading from the lamps to the dimmer switches, because the wires inside the lamp fixtures kept melting. Also, automation was not possible with this system. She explains, “We were out there multiple times a day, checking the treatment, making sure the lamps were still on, and repairing lamps with our multi-tools. We used an infrared camera and an infrared thermometer in the field, so we could constantly see how the heating footprint was being applied to keep it consistent across all the plots.”

Arizona Fescue plant

Arizona Fescue (image: wickipedia.com)

Some Grass was Heat Resistant

Rachel says her biggest finding was that all of the C4 grasses survived the field heat wave, whereas only a third of the Arizona Fescue plants survived. She adds that the initially strong inoculum effects in the greenhouse diminished after outplanting, with no differences between intact, heat-primed inoculum or sterilized inoculum for either plant species in the field. “It may be related to inoculum fatigue,” she explains, “the microbes in the intact treatment may have become exhausted by the time the plants were placed in the field, or maybe they became replaced, consumed, or outcompeted by other microbes within the field site”. Rachel emphasizes that it’s important to conduct more field experiments on plant-microbe interactions. She says, “Field experiments can be more difficult than greenhouse studies, because less is under our control, but we need to embrace this complexity. In practice, inoculants will have to contend with whatever is already present in the field. It’s an exciting time to be in microbial ecology because we are just starting to address how microbes influence each other in real soil communities.”

Grass going to seed in an open-air field

Diminished effects may be related to inoculum fatigue.

What’s In Store?

Now that the team has collected data from the greenhouse and from the heat wave itself, they have started looking at mycorrhizal colonization of plant roots, as well as sequencing of bacterial and archaeal communities from the greenhouse study. Rachel says, “It’s quite an endeavor to link ‘ruler science’ plant restoration to bacterial communities at the cellular level. I’m curious to see if heat waves simply reduce all taxa equally or if there is a re-sorting of the community, favoring genera or species that are really good at handling harsh conditions.”

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Do Soil Microbes Influence Plant Response to Heat Waves?

Rachel Rubin, PhD candidate at Northern Arizona University, is interested in the intersection of extreme climate events and disturbance, which together have a much greater impact on plant communities. She and her team at Northern Arizona University are investigating the role soil microbes play in plant response to heat waves, including associated impacts to microbial-available and plant-available water.

Wheat with sun shining through it

Plants have a tight co-evolutionary history with soil microbes. It has been said that there is no microbe-free plant on earth.

Because heat waves threaten plant productivity, they present a growing challenge for agriculture, rangeland management, and restoration.

Can Soil Microbes Increase Heat Resistance?

Many plants maintain mutualistic associations with a diverse microbiome found within the rhizosphere, the region of soil that directly surrounds plant roots. These “plant growth-promoting rhizobacteria” and arbuscular mycorrhizal fungi provision limiting resources including water, phosphorus and nitrogen in exchange for photosynthetically derived sugars. However, we understand very little about whether extreme events can disrupt these interactions.

Tubes of layered dirt

Fig. 1. Fine roots exploring the inoculum that was added as a band between layers of potting mixture.

Rachel and her team exposed rhizosphere communities to heat stress and evaluated the performance of native grasses both in the greenhouse, and transplanted under an artificial heat wave. They hypothesized that locally-sourced inoculum (a sample of local soil containing the right microbes) or even heat-primed inoculum would help alleviate water stress and improve survival of native grasses.

The Experiments

Rubin started in the greenhouse by planting Blue Grama (Bouteloua gracilis, C4 grass) and Arizona Fescue (Festuca arizonica, C3 grass) and assessed their responsiveness to locally collected soil inoculum that had either been left intact, pre-heated or sterilized (Fig. 1). Rubin says, “We expected that our plants would benefit the most from having intact soil microbe communities. But, we were surprised to find very large differences between plant species. Blue Grama performed the best with intact inoculum, whereas Arizona Fescue performed better with pre-heated or sterilized soil”. This could mean that Blue Grama is more dependent on its microbiome, whereas Arizona Fescue engineers a rhizosphere that contains more parasitic microbes rather than mutualistic microbes. Rachel says that understanding this relationship is important for tailoring plant restoration projects to local conditions. Plants that exhibit high levels of mutualisms with their rhizosphere might require an extra inoculum “boost” in order to successfully establish in highly degraded soil, whereas we should not bother to inoculate plants that tend to harbor parasites within their rhizosphere.

Research plot using infrared sensors and METER soil water content and soil water potential sensors

Fig. 2. A heated plot in the foreground connected to infrared lamps, water content and matric potential sensors, and EM50 data loggers.

After the team studied these responses, they planted the grasses into a degraded section of a grassland and installed an array of 1000-Watt ceramic infrared lamps mounted on steel frames (Fig. 2) to address whether inoculation influenced plant performance and survival. With help from a savvy undergraduate electrical engineering major (Rebecca Valencia), Rubin simulated a two-week heat wave while monitoring soil temperature and moisture using water content and water potential sensors.  She also measured plant performance (height, leaf number and chlorophyll content) before, during, and after the event. Control plots had aluminum “dummy lamps” to account for shading.

An infrared photo of the expirement

An infrared photo, which is how Rachel determined that the heating footprint was evenly distributed on all the plants. The scale bar on the right is in degrees C.

Data obtained from soil sensors helped Rachel to measure heating treatment effects as well as rule out a potential cause for plant mortality: soil moisture. “Soil temperature was on average 10 degrees hotter in heated plots than control plots, but matric potential and soil water content were completely unaffected by heating. This tells us that the grasses died from reasons other than water stress– perhaps a top-kill effect.” Although growing concern over heat waves in agriculture is centered around accompanying droughts, this experiment demonstrates that heating can produce negative effects on some species even when water is in plentiful supply.

Next week:  Learn the results of Rachel’s experiments, some of the challenges the team faced, and the future of this research.

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Lysimeters Determine If Human Waste Composting Can Be More Efficient (Part 2)

In Haiti, untreated human waste contaminating urban areas and water sources has led to widespread waterborne illness.  

Hospital rooms in Haiti with patients infected with cholera

Waterborne disease is the leading cause of death for children under 5. Currently, Haiti is battling the largest cholera outbreak in recent history. Over 1/6 of the population is sickened to date.

Sustainable Organic Integrated Livelihoods (SOIL) has been working to turn human waste into a resource for nutrient management by turning solid waste into compost.  (See part 1).  

Water ways infected with waste and trash

Contaminants making their way into the waterways.

The organization plans on performing experiments with lysimeters, to determine if human waste will contaminate Haitian soil during the composting process.

A river infected with waste right below a huge forest

Even in places where there are toilets, they are often poorly designed or poorly placed. This latrine is located just above a river, where people are getting their bathing and drinking water.

Lysimeters Help Assess Health Hazards

SOIL will use G3 passive capillary lysimeters in an experiment to determine if composting human waste without a barrier between the waste and the soil will result in ecological and/or health hazards.  Why? The problem is “jikaka,” or “poo juice.”  The compost facility currently redistributes it onto the compost and finishing piles, but they would rather not have to manage it. They believe if they remove the concrete slab and allow composting to occur in contact with soil, the composting process will be easier and faster.

Mounds of dirt behind a tree

SOIL’s agricultural team conducts studies on the use of compost to improve farming practices and maximize economic benefits of targeted compost application.

The Experiment

The organization will test their idea as they expand their facility. New compost bins and staging areas for finishing have been built absent concrete pads. G3 passive capillary lysimeters have been installed, three beneath the compost bin, and four beneath the first staging area for finishing. They will be used to monitor the amount of moisture (jikaka) that travels through the soil as well as check for anything harmful that travels with it.

Children holding soil in their hands

SOIL’s human waste compost was found to increase sorghum yields by 400%.

What’s the Future for Konpòs Lakay?

SOIL’s agricultural team studies the use of their compost (Konpòs Lakay) in order to optimize farming practices and the economic benefits of targeted compost application. The data they collect will help them expand the market for Konpòs Lakay, which in turn will support the sustainability of SOIL’s sanitation programs.

For more information on SOIL’s waste treatment efforts, visit their website, or watch the video below, a TEDx talk given by SOIL co-founder, Sasha Kramer.

Discover G3 Drain Gauge passive capillary lysimeters→

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Lysimeters Determine If Human Waste Composting Can Be More Efficient

In Haiti, untreated human waste contaminating urban areas and water sources has led to widespread waterborne illnesses such as typhoid, cholera, and chronic diarrhea.

Human wastes are making their way into Haiti’s waterways.

Human wastes are making their way into Haiti’s waterways.

Sustainable Organic Integrated Livelihoods (SOIL) has been working since 2006 to shift human waste as a threat to public health and source of pollution to being a resource for nutrient management by turning solid waste into compost.  This effort has been critical to sustainable agriculture and reforestation efforts, as topsoil in Haiti has severely eroded over time, contributing to Haiti’s extreme poverty and malnutrition.

Border between Haiti and the Dominican Republic from an aerial view

This is a very famous image of the border between Haiti and the Dominican Republic. It’s often used to demonstrate how badly off Haiti is relative to their neighbors. What you’re actually seeing is the environmental scars of a very different post-colonial history.

Why Compost?  

Topsoil erosion in Haiti was estimated to be 36.6 million metric tons annually in 1990, and it is estimated that only one sixth of the land currently cultivated in Haiti is suitable for agriculture. SOIL combats desertification by producing over 100,000 gallons of agricultural-grade compost made from human waste annually.  SOIL research has shown that this compost can increase crop yields by up to 400%.  The organization has sold over 60,000 gallons of this compost to local farmers and organizations, increasing soil organic matter and nutrients throughout the country.

Waste covers the urban area infecting people and causing problems

Today in Haiti, only 25% of people have access to a toilet – meaning people are forced to go to the bathroom outside or in urban areas, in a plastic bag, which often times gets disposed of in a canal or an empty lot.

How Do They Do It?

SOIL distributes specially constructed toilets throughout Haiti that separate urine from solid waste.  Odors are reduced by covering the solid waste with organic cover material.  The toilet utilizes a five gallon bucket to collect solid waste that can be swapped out when full.

Toilet in Haiti

Instead of flushing nutrients away with fresh water, people use a dry carbon material to cover it up so that it doesn’t smell, and it doesn’t attract flies. This material also provides food for the microbes that will ultimately transform the poop.

The five gallon buckets are collected weekly and taken to the composting facility, where they are dumped into large composting bins.  It takes about 1500 buckets (3-4 days worth) to fill each bin. Bins are required to reach 122°F and left for 2.5 months in order to kill all pathogens.

Waste water transformation chart

Wastes are safely transformed into nutrient-rich compost in a carefully monitored composting treatment process that exceeds the World Heath Organization’s standards for the safe treatment of human waste.

The compost is then removed from the bin and turned by hand. There are three concrete slabs used to manage the finishing process.  Compost is turned horizontally and then moved forward to the next slab, allowing multiple batches to be finishing at the same time, each at a different stage.  After processing, the compost is sifted, bagged, and sold, reinvigorating the agriculturally-based Haitian economy.  

Students study plants sold for agriculture

The compost SOIL produces is bagged under the Haitian Creole brand name “Konpòs Lakay” and then sold for agricultural application, improving both the fertility and water retention of soil. With over four billion people worldwide currently lacking access to waste treatment services, finding ways to provide waste treatment services profitability through the private sector has the potential to dramatically improve public health and agricultural outputs globally.

Continue reading part 2→

Understand the Impact

Watch this 5 minute video filmed by independent parties to see how SOIL is impacting Haitian citizens and the environment.

Read how experiments using lysimeters will help SOIL make the composting process more efficient.  

Download the “Researcher’s complete guide to soil moisture”—>

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Are Biodegradable Mulches Actually Better for the Environment? (Part II)

In a continuation of last week’s post, Henry Sintim, PhD student at Washington State University is investigating whether biodegradable mulches are, in fact, what they claim to be (see part I).

Resercher gathering data from an installation site

Lysimeter readings revealed higher EC measurements.

Leaching

Sintim and his team want to understand what’s leaching through the soil as the mulches degrade.  He installed passive capillary lysimeters at a 55 cm depth to collect leachate samples for analysis of BDM particulates.  He was surprised when the lysimeter readings revealed higher EC measurements. However, the EC in the PE, paper mulch, and no-mulch treatments were also high, hence that could be due to the leaching of accumulated salts in the soil surface. He says, “We have yet to examine the leachate samples for the presence of particulates.”   

Researchers installing lysimeters

Installing lysimeters

Composting Alternatives

If the team finds that some of the BDMs do not biodegrade very well in the field, the alternative could be on-farm composting, which would be more viable than having to deal with polyethylene plastic.  Sintim and his research team have set up a composting study where they have been digitizing the images of the mulches degrading.  He adds, “We buried the mulches in a mesh bag, and periodically we retrieve the bags to study the mulch. There was some black staining on the mesh bag, which we suspect is a nanoparticle called, “carbon black,” used as reinforcing filler in tires and other rubber products.

Scientist studying how mulches degrade over time

The team buried the mulches in compost, and periodically they retrieve the mesh bags to study the mulch.

Sintim says the manufacturers do not disclose the actual constituents of their mulches, so he has arranged to examine the mesh bags with WSU’s scanning electron microscope in order to confirm that the stains were due to the presence of particulates. Sintim confirmed that carbon black was used in their experimental BDM, but they don’t know whether the carbon black was made from petroleum products, as there is non-petroleum-based carbon black.  He is going to determine whether these particles leach through soil by examining leachate samples from the lysimeter. He will also perform more tests to make sure that these nanoparticles are not going to have any adverse effects on the agro-ecosystem.

What’s in the Future?

While Sintim and his colleagues have made important discoveries, there is still work to be done. He and his team are going to collect three more years’ worth of data to see if there really is a BDM that delivers on its promises and if leaching particles pose a threat to the groundwater.

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Are Biodegradable Mulches Actually Better for the Environment?

Henry Sintim, PhD student at Washington State University, is investigating whether biodegradable mulches are, in fact, what they claim to be.

Plant row farm with dirt between each row

Application of plastic mulches conserves water, and helps in weed, pest, and disease control.

He and his research team want to understand what leaches into the soil as the mulches degrade and which ones perform as well as polyethylene-made plastic mulches (PEs) at weed, pest, and disease control.

Plastic Mulch

Application of plastic mulches in agriculture is a common practice by specialty crop producers worldwide. It conserves water, and helps in weed, pest, and disease control, subsequently improving crop yield and quality. Because PE is durable and does not degrade in the soil, you cannot leave it in the field, which ultimately leads to the question of disposal.  When PE is buried in the field, it becomes contaminated with soil and can’t be recycled but instead requires transport to a landfill, increasing production costs. Another problem arises when landfill facilities are not available. When this is the case, growers stockpile PE on their farm, where the rain can wash the mulch down to streams and water bodies. Henry Sintim and his team are investigating whether or not biodegradable plastic mulches (BDMs) could be a viable alternative.

Researchers digging a site up for installation

The team installs a lysimeter beneath the mulches.

Biodegradable Alternatives

Substituting PE with BDM could alleviate the need for disposal. However, Sintim says the potential impact on agricultural soil ecosystems needs to be assessed before adopting biodegradable mulch for field use. For instance, do biodegradable mulches really degrade?  Sintim explains, “By BDM, we mean it is plastic mulch, but it has been made from pure or partial biobased materials. Though there are plastic mulches advertised as biodegradable, none have actually been proven to biodegrade, so the team is examining degradation of different commercial BDM types over time. They have also included an experimental BDM, in which the constituents were specified by the team.”

Sintim is monitoring the degradation of BDM by assessing the material properties and measuring the particle size and surface area via photography: digitizing and analyzing them using Image J software.

Researchers standing at an installation getting data

There are indications that some of the BDMs are performing well.

How Well Do the Mulches Compare?

Sintim also wants to find out how well BDMs maintain microclimate in comparison to PE. Since soil temperature and moisture content are important parameters that govern chemical reaction rates and microbial activity, and are likely to vary among the different BDM treatments, he is monitoring soil moisture dynamics using soil moisture and temperature sensors installed at 10 cm and 20 cm depths. In addition, the team has installed sensors directly underneath the mulches to measure surface temperature and light penetration. Reduction of light penetration is the attribute that helps plastic mulches to control weeds. The team is also assessing soil quality using the USDA Soil Quality Test Kit.  

Sintim says so far one of the commercial BDMs and the experimental BDM had the same yield performance as PE.  He adds, “We don’t have final results yet, and there are a lot of variables that could come into the picture. But I will say there is an indication that some of the BDMs are performing well.”

Next week:  Find out how Sintim will determine what’s leaching into the soil and another alternative for polyethylene plastic mulch.

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Climate Change, Genetics, and the Future World

Climate change scientists face a particular challenge— how to simulate climate change without contributing to it. Paul Heinrich, a Research Informatics Officer associated with the Southwest Experimental Garden Array (SEGA) remembers looking at the numbers for a DOE project that would have used fossil fuel to measure forests’ response to temperature change. “It would have been very, very expensive in fossils fuels to heat a hectare of forest,” he says.

The alternative is, “to use elevation change as a surrogate for climate change so we could do climate change manipulations without the large energy costs.”

SEGA Vegetation Zones diagrams

An overview of the SEGA sites using elevation change as a surrogate for climate change. For more information on these sites, visit http://www.sega.nau.edu/. Photo credit Paul Heinrich

By monitoring organisms across a temperature gradient it is possible to identify genetic variation and traits within a species that could contribute to a species survival under projected future climates.

Control and Monitoring Infrastructure

SEGA is an infrastructure project started in 2012 after researchers at Northern Arizona University’s Merriam-Powell Center for Environmental Research were awarded a $2.8 million dollar NSF grant with a $1 million match from NAU. Consisting of ten fenced garden sites for genetics-based climate change research, SEGA is set on an elevation gradient from 4000 to 9000 feet in the Southwestern United States. Each SEGA site has an elaborate data collection and control system with meteorological stations and site-specific weather information. Custom-engineered Wireless Sensing Actuating and Relay Nodes (WiSARDs) send data packets to a hub which then send the data back to a centralized server.

Because there is inherent moisture content variability from site to site, volumetric water content and soil water potential sensors have been installed to monitor and maintain moisture levels. If there is a change in soil moisture at one site, soil sensors will detect the difference. Software on the server notes the difference and sends a signal to the other sites, turning on irrigation until the soil moisture matches across sites.

SEGA Cyberinfrastructure Major Components diagram

An illustration of SEGA’s cyberinfrastructure and data management system. Photo credit Paul Heinrich.

Having such an elaborate infrastructure creates an opportunity for researchers looking to conduct climate change research. By offering access to the pre-permitted SEGA sites, the hope is that research will generate much-needed data for climate projections and land management decisions.

When asked if the data stream was overwhelming to manage Heinrich said, “Well, not yet. We are just getting started. The system is designed for what SEGA is expected to look like in ten years, where we expect to have 50 billion data points.”

Research Considerations

Climate change projections show temperatures increasing rapidly over the next 50 to 100 years, bringing drought with it. The impact of these changes will be dramatic. Temperature and drought tolerant species will survive, those that are not will die, drastically changing the landscape in areas that are currently water stressed. Pests like the pine beetle and invasive species like cheatgrass will do well in a drier environment where water-stressed natural species will not be able to compete.

Red canyon called Soap Creek AZ from an Aerial view

Soap Creek, AZ from above. With climate change projections it is likely that more land will become marginal. Photo credit Paul Heinrich.

“Foundational species,” or species that have a disproportionate impact on the ecosystem, are the primary focus of the research efforts at SEGA sites. These are the species that drive productivity, herbivore habitat, and carbon fixation in the ecosystem. Unlike forests in other parts of the United States, forests in the Southwest can be dominated by one or two species, which makes potential research subjects easier to identify.

Genetic Variance

Amy Whipple, an Assistant Professor in Biology and the Director of the Merriam-Powell Research Station who oversees the day-to-day activities at SEGA, has been conducting some of her own research at the garden sites. Whipple has studied Piñon Pine, Southwestern White Pine, and has a proposal to study Cottonwood in process.

Whipple says that models currently suggest that Piñon Pine will be gone from Arizona within the next 50 years, adding that the models do not take into account possibilities for evolution or genetic variance that might help the Piñon survive. Her research is largely asking, will trees from hotter, drier locations have a better chance of surviving climate change? “We’re trying to do that with a number of different species to look for ways to mitigate the effects of climate change in the Southwest.”

Researchers documenting a Piñon Pine

Researchers documenting a Piñon Pine. Photo credit Paul Heinrich.

In some of her research on Piñon Pine, it was discovered that four different species were grouped morphologically and geographically from southern Arizona to Central Mexico. While this suggests that the divergence of species has occurred, it also suggests a low migration rate for these tree species. Migration rates of drought and temperature tolerant species is an important consideration when modeling for a future climate. If the migration of genetically adapted species cannot keep up with climate, the land could become marginal as a foundational species dies off.

Climate Change Predictions and Considerations

In the Southwest, there are entire forests that could become grassland in 50 years because the genetic characteristics of the foundational species currently in those regions will not adapt to higher temperatures and drought stress. But what does this mean from a land management perspective?

Ponderosa pine tree hanging off the side of a rocky cliff in the desert

Ponderosa pine trees, a foundational species in some area of the Southwestern United States.

Environmental conservationists maintain that we should protect the unique species that are in a place and that introducing other organisms or genetic material would be an ethical violation. Environmental interventionists make the argument that climate change has been caused by humans, so we have lost the option of remaining bystanders.

Research, Land Management and Policy

Paul Heinrich says that the route we take to manage the land will depend on our end goals. “Places that have trees now, if you want them to have trees 50 years from now, you are going to have to do something about it. The trees that are on the landscape right now are locally adapted to the past climate. They are not necessarily adapted to the future climate. They are probably maladapted to the future climate.”

To be clear, SEGA’s goal is not to promote or implement assisted migration. Instead, Amy Whipple says, SEGA can test what the effects of assisted migration might be. “In a smaller experimental context, we’re asking: how will these plants do if we move them around? What will happen to them if we don’t move them around?’” The goal is to provide decision makers with the data they need to make informed decisions about how to manage the land.

Image of a Meadow with trees in the distance and a set of mountains

The Arboretum Meadow in Flagstaff, AZ. Home of one of the SEGA research sites. Photo credit Paul Heinrich.

Whipple’s own view is that we may no longer have the option of doing nothing. “Unless major changes are made for the carbon balance of the planet, keeping things the same is not a viable option. Managing for a static past condition is not viable anymore.”

Remaining Questions

Both Heinrich and Whipple acknowledge that these are inherently difficult questions. Ultimately the public and land managers must make these decisions. In the meantime, data from SEGA research may help ensure better predictions, better decisions, and better outcomes.

To find out more about conducting your own climate change research using SEGA go to: http://www.sega.nau.edu/use-sega

Download the “Researcher’s complete guide to soil moisture”—>

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Green Roofs—Do They Work?

Green roofs are being built in large cities to provide stormwater management, reduce the urban heat island effect, and improve air quality—but are they effective?   John Buck, an innovative soil scientist based in Pittsburgh, Pennsylvania, has been trying to quantitatively answer this question in many different cities using soil monitoring equipment in order to determine the efficacy and best types of green infrastructure for managing stormwater.  

Garden on a rooftop with flowers and a city around it

A green roof installation site at the Allegheny County Office Building in Pennsylvania.

Why Green Roofs?

In older cities, stormwater runoff is typically combined with sewage flows, and these combined waters are treated at a sewage treatment plant during dry weather and light rain events. Unfortunately, during more substantial storms (sometimes just a few mm of rain) the combined flows exceed the ability of the sewage treatment plant, and are discharged without treatment to surface waters as “combined sewage overflows” (CSOs). One of the ways to mitigate CSOs is to capture and store stormwater to keep it out of the combined sewer.  

A green roof is essentially a garden on a roof, but rather than growing plants in soil, installers use a synthetic substrate made of expanded shale, expanded clay, crushed brick, or other highly porous, lightweight material with high infiltration rates.  During a storm event, water will soak into the air-filled pore space in the substrate, which acts like a sponge to soak up the rain. Excess water will flow into a subsurface drainage layer and will leave the roof garden via existing roof drains. Because a substantial fraction of the stormwater is stored in the substrate, it can later dissipate through evapotranspiration instead of contributing to stormwater volume and CSOs.

Researcher kneeling testing soil with a soil sensor

Researchers are using soil moisture sensors for measuring temperature, bulk electrical conductivity and volumetric water content in green roofs and green infrastructure.

Finding Answers

Designers and regulators want to know how well green roofs work and if they are being over-engineered. They want answers to questions such as: “What sort of substrate should I be using? What type of plants can survive green roof conditions? Will I need to irrigate the green roof when there are no storms to water the plants?” and, “Will the green roof work as well during a one-inch storm that occurs over a half hour versus a five-inch storm that occurs over five days?”  

Buck is using soil lysimeters and modified tipping bucket rain gauges to measure the quantity, intensity, and quality of water coming into and going out of the green roofs.  He also tracks weather parameters and calculates daily evapotranspiration of landscapes.  Using soil sensors, he measures electrical conductivity (dissolved salts), volumetric water content, and temperature.  He has installed data loggers that send data to the web via GSM cellular connection, allowing stakeholders access to the data in real-time.  This data telemetry provides additional data security, immediately updated results, instant feedback of system problems, and an easy way to share data with others.

Green Roof Runoff Reduction graph

Visualized data of the 87% annualized runoff reduction at Phipps Conservatory green roof site in Pittsburgh, PA.

What Has Been Learned?

Buck discovered that green roofs have much more capacity than people ever imagined.  At The Penfield Apartments in St. Paul, Minnesota, the green roof retained enough water to reduce runoff to about half of a conventional roof, and the peak intensity of the runoff was about one-quarter of what it would have been without the green roof.  At Phipps Conservatory in Pittsburgh, there was an 87% annualized runoff reduction and almost no runoff from typical summer rain events.  Buck comments, “Interestingly, on the Penfield project, we expected better hydrologic performance where soils were thicker, but there was no difference, or results were slightly the reverse of expectations. That reversal was likely due to the confounding influence of irrigation, which was probably non-uniform and not metered or measured by the rain gauge.”

Next week:  Read about some of the challenges John Buck sees for the future, and what kind of measurements he suggests researchers make, as they continue to validate the effectiveness of these urban ecosystems.

Download the “Researcher’s complete guide to soil moisture”—>

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Can Wastewater Save The United Arab Emirates’ Groundwater? (Part II)

With very little recharge and irrigation comprising 75% of groundwater use, natural water resources in the United Arab Emirates region are disappearing fast (see part I).  Wafa Al Yamani and her PhD advisor, Dr. Brent Clothier, are investigating using treated sewage effluent and groundwater for irrigating the desert forests along UAE motorways.

Abu Dhabi from the ocean looking at the city

Abu Dhabi

Infiltrometers Predict Dripper Behavior:

Wafa and her team used what they call, “the Ankeny twin head method” for site evaluation with infiltrometers, and they’ve been able to use it to predict dripper behavior.  They begin with the head at -60 mm, do a series of measurements to measure steady infiltration, and repeat the process at -5 mm.  They use those measurements to solve Woodings equation which has two unknowns: saturated hydraulic conductivity and capillarity.  Dr. Clothier says, “We’ve done it at two heads, and we can use Woodings equation to solve for the slope of the exponential conductivity curve.  Hence, I can predict with time, the movement of the wetting front away from the dripper.   That’s been very useful to work out what volume of soil we’re wetting.  It tells us if we should have one or two drippers.  In this forest, we think we can get away with two drippers because if they irrigate for two hours, the radius of the wet front will be 20 cm, and the depth will be about 40 cm, which is a sufficient volume of water for the tree roots.”  Dr. Clothier says they also constructed a small dyke around the drippers so they could contain the water inside the drip zone in case of hydrophobicity or uneven sand.  

researcher recording data while sitting on the floor

Wafa on site, using the twin head method.

Treated Effluent Resolves Salinity Issues

Historically, the UAE pumped their sewage effluent into the Arabian Gulf, but recently, there has been a shift toward seeing it as a valuable water resource, not only for the desert forest, but for irrigation of fruit crops and date palms.  Dr. Clothier says, “Once we started getting our results we realized we were irrigating with groundwater that had high salinity, about 10 dS/m, and that treated sewage effluent had only 0.5 dS/m.  This was an important discovery because with the high salinity groundwater, you have to over-irrigate to maintain a salt leaching fraction.  However, when we apply the treated sewage effluent, we immediately see a response in the trees because it has 1/20th of the salt load.”

Dr. Clothier says that there is one problem with the trees responding so well to the sewage effluent.  The treated sewage effluent makes the trees grow taller and faster, so if the ecosystem service you want from the desert forest is that they’re 4-6 meters high, it becomes an issue.  He adds,”This is actually a positive problem, because we can now induce deficit irrigation, thereby creating a larger resource of treated sewage effluent in order to irrigate far more forests.”

Large white irrigation tanks sitting in sand in the desert

Researchers irrigated with water from these tanks which stored groundwater and treated sewage effluent.

What’s The Future?

Dr. Clothier says they started with a pilot study in the UAE in 2014, and it was so successful that they ended up with two fully-funded four-year projects, one on treated sewage effluent, and one investigating the irrigation of date palms. He says they have another 3 ½ years of work in the UAE on these projects, and in the end, their goal is to develop a model for forestry irrigation and soil salinity management, along with developing capability for the measurement and modeling of irrigation impacts on sustainable forestry.  They have recently developed a prototype of a computerized decision support tool for irrigation which will provide sustainable irrigation advice to optimize water use.  The support tool takes into account the need to maintain salt leaching, and actual irrigation records can be entered to enable real-time use.

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Can Wastewater Save The United Arab Emirates’ Groundwater?

The hyper-arid United Arab Emirates (UAE) has a rapidly dwindling supply of groundwater, and that water is becoming increasingly saline.

Image of the city of Dubai at night on the coast of the UAE

Dubai is situated on the coast of the UAE.

With very little recharge and irrigation comprising 75% of groundwater use, natural water resources in this region are disappearing fast.  PhD candidate Wafa Al Yamani works for the Environmental Agency of Abu Dhabi, which has contracted with Plant and Food Research in New Zealand to investigate using treated sewage effluent and groundwater for irrigating the desert forests along their motorways.  

Sidr tree plantation in the UAE forest in the sand

Sidr trees in the UAE forest.

The Desert Forests

The UAE desalinates all the water for their cities, so the tertiary treated sewage effluent from these cities could be a viable resource, replacing some groundwater for irrigation of the desert forests. These forests perform a wide range of ecosystem services from sand stabilization along all UAE motorways to harboring a great deal of biodiversity.  There is also a cultural association with the forests.  The original ruler of the UAE, Sheikh Zayed, embarked on a program in the 1970s of “greening the desert,” so the people see the desert forests as a legacy of their founder.

Infiltrometer pushing sand and being measured

Infiltrometers were used to examine how the drip irrigation system worked.

Measuring Water Use:

Wafa and her PhD advisor, Dr. Brent Clothier, had a goal to minimize groundwater use and maximize value by quantifying the irrigation needs of the UAE’s five most important desert-forestry species.  They also wanted to determine the impact of treated sewage effluent on forest growth and health.  They used infiltrometers to examine how the drip irrigation system worked.  Dr. Clothier says, “These soils have hydraulic conductivities of between 2 and 5 meters an hour.  They are highly permeable desert sands.  We can find out how wide the bulb (the wetted area underneath an irrigation dripper) is and how deep the water will travel by using an infiltrometer to look at the hydraulic properties of the soil.”  Dr. Clothier has also developed software to predict water movement radially, with depth and with the time that the drippers are on.  He comments, “We’ve now got a setup of two drippers per tree, and we will use that in the future for modeling how the trees are taking up water from the root zone.”

Tree with 20cm dykes accessing the dripper water

Researchers built dykes of 20 cm to stop surface redistribution of dripper water.

The scientists used a heat pulse method to measure tree water-use by comparing sap flow with evaporative demand (ETo).  They used Time Domain Reflectometry (TDR) to measure soil water content, and they have developed a “light stick” using light sensors to detect the shadow area of the trees to measure trees’ leaf area in order to predict the crop factor that will enable prediction of tree water-use from ETo.

Next week:  Find out how Wafa and her team use infiltrometers to predict dripper behavior and how the treated effluent resolves salinity issues.

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